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Abstract We propose hybrid digital–analog (DA) learning algorithms on Rydberg atom arrays, combining the potentially practical utility and near-term realizability of quantum learning with the rapidly scaling architectures of neutral atoms. Our construction requires only single-qubit operations in the digital setting and global driving according to the Rydberg Hamiltonian in the analog setting. We perform a comprehensive numerical study of our algorithm on both classical and quantum data, given respectively by handwritten digit classification and unsupervised quantum phase boundary learning. We show in the two representative problems that DA learning is not only feasible in the near term, but also requires shorter circuit depths and is more robust to realistic error models as compared to digital learning schemes. Our results suggest that DA learning opens a promising path towards improved variational quantum learning experiments in the near term. 

Abstract A symmetry of a state $|\psi ⟩$is a unitary operator of which $|\psi ⟩$is an eigenvector. When $|\psi ⟩$is an unknown state supplied by a black-box oracle, the state’s symmetries provide key physical insight into the quantum system; symmetries also boost many crucial quantum learning techniques. In this paper, we develop a variational hybrid quantum–classical learning scheme to systematically probe for symmetries of $|\psi ⟩$with noa prioriassumptions about the state. This procedure can be used to learn various symmetries at the same time. In order to avoid re-learning already known symmetries, we introduce an interactive protocol with a classical deep neural net. The classical net thereby regularizes against repetitive findings and allows our algorithm to terminate empirically with all possible symmetries found. An iteration of the learning algorithm can be implemented efficiently with non-local SWAP gates; we also give a less efficient algorithm with only local operations, which may be more appropriate for current noisy quantum devices. We simulate our algorithm on representative families of states, including cluster states and ground states of Rydberg and Ising Hamiltonians. We also find that the numerical query complexity scales well for up to moderate system sizes. 

Gene regulatory network inference is essential to uncover complex relationships among gene pathways and inform downstream experiments, ultimately enabling regulatory network re-engineering. Network inference from transcriptional time-series data requires accurate, interpretable, and efficient determination of causal relationships among thousands of genes. Here, we develop Bootstrap Elastic net regression from Time Series (BETS), a statistical framework based on Granger causality for the recovery of a directed gene network from transcriptional time-series data. BETS uses elastic net regression and stability selection from bootstrapped samples to infer causal relationships among genes. BETS is highly parallelized, enabling efficient analysis of large transcriptional data sets. We show competitive accuracy on a community benchmark, the DREAM4 100-gene network inference challenge, where BETS is one of the fastest among methods of similar performance and additionally infers whether causal effects are activating or inhibitory. We apply BETS to transcriptional time-series data of differentially-expressed genes from A549 cells exposed to glucocorticoids over a period of 12 hours. We identify a network of 2768 genes and 31,945 directed edges (FDR ≤ 0.2). We validate inferred causal network edges using two external data sources: Overexpression experiments on the same glucocorticoid system, and genetic variants associated with inferred edges in primary lung tissue in the Genotype-Tissue Expression (GTEx) v6 project. BETS is available as an open source software package at https://github.com/lujonathanh/BETS .